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Maintenance of Mammary Epithelial Phenotype by Transcription Factor Runx1 Through Mitotic Gene Bookmarking

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Author :
Release : 2019
Genre : Breast
Kind : eBook
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Book Synopsis Maintenance of Mammary Epithelial Phenotype by Transcription Factor Runx1 Through Mitotic Gene Bookmarking by : Joshua Rose

Download or read book Maintenance of Mammary Epithelial Phenotype by Transcription Factor Runx1 Through Mitotic Gene Bookmarking written by Joshua Rose. This book was released on 2019. Available in PDF, EPUB and Kindle. Book excerpt: Breast cancer arises from a series of acquired mutations that disrupt normal mammary epithelial homeostasis and create multi-potent cancer stem cells that can differentiate into clinically distinct breast cancer subtypes. Despite improved therapies and advances in early detection, breast cancer remains the leading diagnosed cancer in women. A predominant mechanism initiating invasion and migration for a variety of cancers including breast, is epithelial-to-mesenchymal transition (EMT). EMT-- a trans-differentiation process through which mammary epithelial cells acquire a more aggressive mesenchymal phenotype--is a regulated process during early mammary gland development and involves many transcription factors involved in cell lineage commitment, proliferation, and growth. Despite accumulating evidence for a broad understanding of EMT regulation, the mechanism(s) by which mammary epithelial cells maintain their phenotype is unknown. Mitotic gene bookmarking, i.e., transcription factor binding to target genes during mitosis for post mitotic regulation, is a key epigenetic mechanism to convey regulatory information for cell proliferation, growth, and identity through successive cell divisions. Many phenotypic transcription factors, including the hematopoietic Runt Related Transcription Factor 1 (RUNX1/AML1), bookmark target genes during mitosis. Despite growing evidence, a role for mitotic gene bookmarking in maintaining mammary epithelial phenotype has not been investigated. RUNX1 has been recently identified to play key roles in breast cancer development and progression. Importantly, RUNX1 stabilizes the normal breast epithelial phenotype and prevents EMT through repression of EMT-initiating pathways. Findings reported in this thesis demonstrate that RUNX1 mitotically bookmarks both RNA Pol I and II transcribed genes involved in proliferation, growth, and mammary epithelial phenotype maintenance. Inhibition of RUNX1 DNA binding by a specific small molecule inhibitor led to phenotypic changes, apoptosis, differences in global protein synthesis, and differential expression of ribosomal RNA as well as protein coding genes and long non-coding RNA genes involved in cellular phenotype. Together these findings reveal a novel epigenetic regulatory role of RUNX1 in normal-like breast epithelial cells and strongly suggest that mitotic bookmarking of target genes by RUNX1 is required to maintain breast epithelial phenotype. Disruption of RUNX1 bookmarking results in initiation of epithelial to mesenchymal transition, an essential first step in the onset of breast cancer.

Investigating the RUNX1-CBF[beta] Transcription Factor Complex as a Mitotic Gene Bookmark to Maintain the Normal Mammary Epithelial Phenotype

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Release : 2020
Genre : Breast
Kind : eBook
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Book Synopsis Investigating the RUNX1-CBF[beta] Transcription Factor Complex as a Mitotic Gene Bookmark to Maintain the Normal Mammary Epithelial Phenotype by : Eliana Moskovitz

Download or read book Investigating the RUNX1-CBF[beta] Transcription Factor Complex as a Mitotic Gene Bookmark to Maintain the Normal Mammary Epithelial Phenotype written by Eliana Moskovitz. This book was released on 2020. Available in PDF, EPUB and Kindle. Book excerpt: Disruption of normal mammary epithelial cell homeostasis through acquisition of deleterious somatic and/or germline mutations leads to breast cancer development. Breast cancer is the most commonly diagnosed cancer among women worldwide, and is associated with the second highest amount of cancer-related deaths. Breast cancer mortality rates are decreasing, likely through increased methods of detection and development of targeted therapies. However, due to the complexity and heterogeneity of the disease, the incidence rate remains high and the molecular events that lead to breast cancer initiation and progression are poorly understood. The epithelial-to-mesenchymal transition (EMT) is an essential molecular process involved in the initiation and progression of epithelial-based tumors. Loss of cell-cell connections, altered extracellular matrix interactions, and dramatic cytoskeletal changes promote cell individuality and development of a migratory and often invasive phenotype. Under normal physiological conditions, EMT is involved in processes such as embryonic development and wound healing. EMT is tightly regulated by a combination of signaling pathways and epigenetic factors. However, the molecular mechanisms that suppress EMT within the normal epithelium to prevent tumorigenesis remain understudied. Mitotic gene bookmarking -- retention of cell lineage-specific transcription factors with target genes, together with histone modifications, specific DNA methylation patterns, and components of transcriptional machinery on mitotic chromosomes -- is an epigenetic mechanism that maintains cellular identity throughout successive cell divisions. Mitotic occupancy and post-mitotic transcription regulation of target genes involved in proliferation, growth, and cellular identity by transcription factors, reestablishes epithelial-specific transcriptional programs in newly formed progeny cells. The RUNX1-CBF[Beta] heterodimeric transcription factor complex is essential for normal mammary gland development. Mutations in both subunits have been identified in breast cancers. Studies by our group have shown that RUNX proteins act as mitotic bookmarks in a variety of tissue types and depletion of RUNX1 in normal mammary epithelial cells leads to EMT. Findings reported in this study show that inhibition of the RUNX1-CBF[Beta] interaction disrupts the normal mammary epithelial phenotype, alters cell cycle regulation, and initiates EMT. Furthermore, results demonstrate RUNX1 is maintained on mitotic chromosomes during all topologically identifiable stages of mitosis in live MCF10A cells. Conditions and methods have been optimized to study the specific function of the RUNX1-CBF[Beta] transcription factor complex as a mitotic bookmark, essential for mitotic and post-mitotic transcriptional regulation of genes involved in proliferation, cell growth, and epithelial cell identity throughout successive cell divisions. Further studies utilizing these conditions and methods are required to address the functional role of the RUNX1-CBF[Beta] transcription factor complex as an essential mitotic bookmark involved in phenotypic maintenance in the normal mammary epithelium.

Investigating the Effects of Loss of Runx1 and Its Role in Mitotic Gene Bookmarking and Breast Cancer

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Release : 2024
Genre : Breast
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Book Synopsis Investigating the Effects of Loss of Runx1 and Its Role in Mitotic Gene Bookmarking and Breast Cancer by : Priyanka Gajanan Chavarkar

Download or read book Investigating the Effects of Loss of Runx1 and Its Role in Mitotic Gene Bookmarking and Breast Cancer written by Priyanka Gajanan Chavarkar. This book was released on 2024. Available in PDF, EPUB and Kindle. Book excerpt: While the transformation of cancer cells through epigenetic modifications has been recognized for some time, recent advances in genome-wide genomic and epigenomic sequencing has revealed the extensive presence of mutations in epigenetic regulators and the comprehensive scope of epigenomic changes in cancer cells. It is now evident that genetic and epigenetic mechanisms are not mutually exclusive and work in tandem to facilitate the acquisition of the characteristic traits of cancer.Mitosis plays a pivotal role in transmitting lineage specific transcriptional control, imparting phenotypic memory and determination of cell fate. Nuclear organization and three-dimensional architecture of the genome is disrupted during mitosis, yet daughter cells preserve their gene expression patterns and phenotypic state. During mitosis most transcription factors dissociate from promoter sequences as well as from bulk chromatin. However, around 20% of transcription factors and chromatin binding proteins are retained at their specific target sites. Retention of the RUNX1 tumor suppressor with target gene loci on mitotic chromosomes during cell division, a process we designate "Mitotic gene bookmarking," which epigenetically sustains competency for gene expression during cell division. In this study, we are investigating the role of RUNX1 in maintaining the epithelial phenotype and its loss in transformation to the mesenchymal phenotype using degron technology, targeting the RUNX1 factor for rapid degradation, to directly establish the requirement for this tumor suppressor to sustain gene expression that is obligatory for physiological control of normal and tumor phenotypes. By combing the expression profiles of mature RNA and nascent transcript analysis we were able to measure rapid changes in the core of RUNX1 regulatory network and obtain a list of differentially expressed genes. Furthermore, loss of RUNX1 results in the emergence of a heterogenous population of cells that are resistant to apoptosis and undergo a transition between cellular states exhibiting partial EMT and phenotypic plasticity.

Introduction to Epigenetics

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Author :
Release : 2021-03-23
Genre : Science
Kind : eBook
Book Rating : 701/5 ( reviews)

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Book Synopsis Introduction to Epigenetics by : Renato Paro

Download or read book Introduction to Epigenetics written by Renato Paro. This book was released on 2021-03-23. Available in PDF, EPUB and Kindle. Book excerpt: This open access textbook leads the reader from basic concepts of chromatin structure and function and RNA mechanisms to the understanding of epigenetics, imprinting, regeneration and reprogramming. The textbook treats epigenetic phenomena in animals, as well as plants. Written by four internationally known experts and senior lecturers in this field, it provides a valuable tool for Master- and PhD- students who need to comprehend the principles of epigenetics, or wish to gain a deeper knowledge in this field. After reading this book, the student will: Have an understanding of the basic toolbox of epigenetic regulation Know how genetic and epigenetic information layers are interconnected Be able to explain complex epigenetic phenomena by understanding the structures and principles of the underlying molecular mechanisms Understand how misregulated epigenetic mechanisms can lead to disease

Molecular Genetic Pathology

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Release : 2013-03-05
Genre : Medical
Kind : eBook
Book Rating : 993/5 ( reviews)

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Book Synopsis Molecular Genetic Pathology by : Liang Cheng

Download or read book Molecular Genetic Pathology written by Liang Cheng. This book was released on 2013-03-05. Available in PDF, EPUB and Kindle. Book excerpt: Molecular Genetic Pathology, Second Edition presents up-to-date material containing fundamental information relevant to the clinical practice of molecular genetic pathology. Fully updated in each area and expanded to include identification of new infectious agents (H1N1), new diagnostic biomarkers and biomarkers for targeted cancer therapy. This edition is also expanded to include the many new technologies that have become available in the past few years such as microarray (AmpliChip) and high throughput deep sequencing, which will certainly change the clinical practice of molecular genetic pathology. Part I examines the clinical aspects of molecular biology and technology, genomics. Poharmacogenomics and proteomics, while Part II covers the clinically relevant information of medical genetics, hematology, transfusion medicine, oncology, and forensic pathology. Supplemented with many useful figures and presented in a helpful bullet-point format, Molecular Genetic Pathology, Second Edition provides a unique reference for practicing pathologists, oncologists, internists, and medical genetisists. Furthermore, a book with concise overview of the field and highlights of clinical applications will certainly help those trainees, including pathology residents, genetics residents, molecular pathology fellows, internists, hematology/oncology fellows, and medical technologists in preparing for their board examination/certification.

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