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A Coupled Electro-Chemical-Mechanical Multi-Scale Computational Framework for Simulation of Skeletal Muscles

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Release : 2015
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Kind : eBook
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Book Synopsis A Coupled Electro-Chemical-Mechanical Multi-Scale Computational Framework for Simulation of Skeletal Muscles by : Yantao Zhang

Download or read book A Coupled Electro-Chemical-Mechanical Multi-Scale Computational Framework for Simulation of Skeletal Muscles written by Yantao Zhang. This book was released on 2015. Available in PDF, EPUB and Kindle. Book excerpt: This work focuses on electro-chemical-mechanical multi-scale simulation of the excitation-contraction of skeletal muscle, including electro-chemical excitation process in the neural system which activates the contraction of muscle fibers, the combined effects of active fiber contraction and passive extracellular matrix (ECM) mechanical deformation, and their resulting force generation in the muscle components. In the neural systems, the Fitzhugh-Nagumo (FHN) equation is solved to simulate the propagation of neural signals (action potential) in neural trees and muscle fibers using multi-dimensional FHN discretizations. The calculated neural signal is consequently used as the input for the calcium dynamics model, which describes the chemical processes in the muscle fibers. Based on the calculated calcium concentration, the activation distribution in the muscle tissue is then obtained, which determines the active force muscle fiber can generate voluntarily. To study the mechanics associated with the composition of muscle fibers and ECM, the microstructure of skeletal muscle is reconstructed from images, from which the homogenized material property in the continuum level is calculated. By varying the microstructure model, their morphological effect on the muscle performance is studied and compared with experimental observation. Computationally, the physiological models in excitation dynamics are solved by finite difference methods, and their accuracy, efficiency and stability conditions are studied respectively. For the cellular and component scale models, the 3-dimensional reproducing kernel particle method (RKPM) together with stabilized conforming nodal integration are employed. The simulation models are constructed based on medical images, where the pixel points are directly used as meshfree nodes. This computational model has been used to investigate the source of reduced force generation associated with ageing or diseases within muscles due to the malfunctioning in the subscale units. Through the proposed computational models, this research demonstrates how the stiffened connective tissue reduces force generation and how the frequency of neural stimulation affects force generation in the skeletal muscle.

Advanced HPC-based Computational Modeling in Biomechanics and Systems Biology

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Release : 2019-04-04
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Kind : eBook
Book Rating : 172/5 ( reviews)

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Book Synopsis Advanced HPC-based Computational Modeling in Biomechanics and Systems Biology by : Mariano Vázquez

Download or read book Advanced HPC-based Computational Modeling in Biomechanics and Systems Biology written by Mariano Vázquez. This book was released on 2019-04-04. Available in PDF, EPUB and Kindle. Book excerpt: This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.

Computer Models in Biomechanics

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Release : 2012-10-16
Genre : Technology & Engineering
Kind : eBook
Book Rating : 647/5 ( reviews)

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Book Synopsis Computer Models in Biomechanics by : Gerhard A. Holzapfel

Download or read book Computer Models in Biomechanics written by Gerhard A. Holzapfel. This book was released on 2012-10-16. Available in PDF, EPUB and Kindle. Book excerpt: This book contains a collection of papers that were presented at the IUTAM Symposium on “Computer Models in Biomechanics: From Nano to Macro” held at Stanford University, California, USA, from August 29 to September 2, 2011. It contains state-of-the-art papers on: - Protein and Cell Mechanics: coarse-grained model for unfolded proteins, collagen-proteoglycan structural interactions in the cornea, simulations of cell behavior on substrates - Muscle Mechanics: modeling approaches for Ca2+–regulated smooth muscle contraction, smooth muscle modeling using continuum thermodynamical frameworks, cross-bridge model describing the mechanoenergetics of actomyosin interaction, multiscale skeletal muscle modeling - Cardiovascular Mechanics: multiscale modeling of arterial adaptations by incorporating molecular mechanisms, cardiovascular tissue damage, dissection properties of aortic aneurysms, intracranial aneurysms, electromechanics of the heart, hemodynamic alterations associated with arterial remodeling following aortic coarctation, patient-specific surgery planning for the Fontan procedure - Multiphasic Models: solutes in hydrated biological tissues, reformulation of mixture theory-based poroelasticity for interstitial tissue growth, tumor therapies of brain tissue, remodeling of microcirculation in liver lobes, reactions, mass transport and mechanics of tumor growth, water transport modeling in the brain, crack modeling of swelling porous media - Morphogenesis, Biological Tissues and Organs: mechanisms of brain morphogenesis, micromechanical modeling of anterior cruciate ligaments, mechanical characterization of the human liver, in vivo validation of predictive models for bone remodeling and mechanobiology, bridging scales in respiratory mechanics

Multiscale Simulations of Electrochemistry Systems - Computational Aspects

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Release : 2008-10
Genre : Science
Kind : eBook
Book Rating : 694/5 ( reviews)

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Book Synopsis Multiscale Simulations of Electrochemistry Systems - Computational Aspects by : V. Subramanian

Download or read book Multiscale Simulations of Electrochemistry Systems - Computational Aspects written by V. Subramanian. This book was released on 2008-10. Available in PDF, EPUB and Kindle. Book excerpt: The papers included in this issue of ECS Transactions were originally presented in the symposium ¿Multiscale Simulations of Electrochemistry Systems ¿ Computational Aspects¿, held during the 213th meeting of The Electrochemical Society, in Phoenix, Arizona from May 18 to 23, 2008.

Multiscale Modeling of the Skeletal System

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Release : 2011-12-15
Genre : Technology & Engineering
Kind : eBook
Book Rating : 425/5 ( reviews)

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Book Synopsis Multiscale Modeling of the Skeletal System by : Marco Viceconti

Download or read book Multiscale Modeling of the Skeletal System written by Marco Viceconti. This book was released on 2011-12-15. Available in PDF, EPUB and Kindle. Book excerpt: Integrative approaches to biomedical research promise to advance our understanding of the human body and physiopathology of diseases. In this book, the author focuses on the skeletal system, demonstrating how multiscale modeling can determine the relationship between bone mechanics and disease. Introductory chapters explain the concept of integrative research, what a model is, predictive modeling, and the computational methods used throughout the book. Starting with whole body anatomy, physiology and modeling, subsequent chapters scale down from bone and tissue levels to the cellular level, where the modeling of mechanobiological processes is addressed. Finally, the principles are applied to address truly complex, multiscale interactions. Special attention is given to real-world clinical applications: one in pediatric skeletal oncology and one on the prediction of fracture risks in osteoporotic patients. This book has wide interdisciplinary appeal and is a valuable resource for researchers in mechanical and biomedical engineering, quantitative physiology and computational biology.

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