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A Combinatorial Approach to Genome-wide Ortholog Assignment Via Genome Rearrangement

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Author :
Release : 2007
Genre : Gene mapping
Kind : eBook
Book Rating : /5 ( reviews)

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Book Synopsis A Combinatorial Approach to Genome-wide Ortholog Assignment Via Genome Rearrangement by : Zheng Fu

Download or read book A Combinatorial Approach to Genome-wide Ortholog Assignment Via Genome Rearrangement written by Zheng Fu. This book was released on 2007. Available in PDF, EPUB and Kindle. Book excerpt:

Combinatorial Approaches to Accurate Identification of Orthologous Genes

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Author :
Release : 2011
Genre : Bioinformatics
Kind : eBook
Book Rating : 571/5 ( reviews)

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Book Synopsis Combinatorial Approaches to Accurate Identification of Orthologous Genes by : Guanqun Shi

Download or read book Combinatorial Approaches to Accurate Identification of Orthologous Genes written by Guanqun Shi. This book was released on 2011. Available in PDF, EPUB and Kindle. Book excerpt: The accurate identification of orthologous genes across different species is a critical and challenging problem in comparative genomics and has a wide spectrum of biological applications including gene function inference, evolutionary studies and systems biology. During the past several years, many methods have been proposed for ortholog assignment based on sequence similarity, phylogenetic approaches, synteny information, and genome rearrangement. Although these methods share many commonly assigned orthologs, each method tends to produce an ortholog assignment significantly different from the others.

Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques

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Release : 2006-08-29
Genre : Computers
Kind : eBook
Book Rating : 450/5 ( reviews)

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Book Synopsis Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques by : Josep Diaz

Download or read book Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques written by Josep Diaz. This book was released on 2006-08-29. Available in PDF, EPUB and Kindle. Book excerpt: This is the joint refereed proceedings of the 9th International Workshop on Approximation Algorithms for Combinatorial Optimization Problems, APPROX 2006 and the 10th International Workshop on Randomization and Computation, RANDOM 2006. The book presents 44 carefully reviewed and revised full papers. Among the topics covered are design and analysis of approximation algorithms, hardness of approximation problems, small spaces and data streaming algorithms, embeddings and metric space methods, and more.

Computational Systems Bioinformatics (Volume 6) - Proceedings Of The Conference Csb 2007

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Release : 2007-09-12
Genre : Science
Kind : eBook
Book Rating : 097/5 ( reviews)

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Book Synopsis Computational Systems Bioinformatics (Volume 6) - Proceedings Of The Conference Csb 2007 by : Peter Markstein

Download or read book Computational Systems Bioinformatics (Volume 6) - Proceedings Of The Conference Csb 2007 written by Peter Markstein. This book was released on 2007-09-12. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains about 40 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. Abstracts from the keynote addresses and invited talks are also included.The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field./a

Computational Systems Bioinformatics

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Author :
Release : 2007
Genre : Computers
Kind : eBook
Book Rating : 731/5 ( reviews)

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Book Synopsis Computational Systems Bioinformatics by : Peter Markstein

Download or read book Computational Systems Bioinformatics written by Peter Markstein. This book was released on 2007. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains about 40 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. Abstracts from the keynote addresses and invited talks are also included. The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field. Sample Chapter(s). Chapter 1: Whole-Genome Analysis of Dorsal Gradient Thresholds in the Drosophila Embryo (102 KB). Contents: Learning Predictive Models of Gene Regulation (C Leslie); Algorithms for Selecting Breakpoint Locations to Optimize Diversity in Protein Engineering by Site-Directed Protein Recombination (W Zheng et al.); Cancer Molecular Pattern Discovery by Subspace Consensus Kernel Classification (X Han); Transcriptional Profiling of Definitive Endoderm Derived from Human Embryonic Stem Cells (H Liu et al.); A Markov Model Based Analysis of Stochastic Biochemical Systems (P Ghosh et al.); Clustering of Main Orthologs for Multiple Genomes (Z Fu & T Jiang); Extraction, Quantification and Visualization of Protein Pockets (X Zhang & C Bajaj); Consensus Contact Prediction by Linear Programming (X Gao et al.); An Active Visual Search Interface for Medline (W Xuan et al.); Exact and Heuristic Algorithms for Weighted Cluster Editing (S Rahmann et al.); Reconcilation with Non-binary Species Trees (B Vernot et al.); and other papers. Readership: Research and application community in bioinformatics, systems biology, medicine, pharmacology and biotechnology. Graduate researchers in bioinformatics and computational biology.

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