Share

Coarse-Grained Modeling of Biomolecules

Download Coarse-Grained Modeling of Biomolecules PDF Online Free

Author :
Release : 2017-10-30
Genre : Science
Kind : eBook
Book Rating : 170/5 ( reviews)

GET EBOOK


Book Synopsis Coarse-Grained Modeling of Biomolecules by : Garegin A. Papoian

Download or read book Coarse-Grained Modeling of Biomolecules written by Garegin A. Papoian. This book was released on 2017-10-30. Available in PDF, EPUB and Kindle. Book excerpt: "The chapters in this book survey the progress in simulating biomolecular dynamics.... The images conjured up by this work are not yet universally loved, but are beginning to bring new insights into the study of biological structure and function. The future will decide whether this scientific movement can bring forth its Picasso or Modigliani." –from the Foreword by Peter G. Wolynes, Bullard-Welch Foundation Professor of Science, Rice University This book highlights the state-of-art in coarse-grained modeling of biomolecules, covering both fundamentals as well as various cutting edge applications. Coarse-graining of biomolecules is an area of rapid advances, with numerous new force fields having appeared recently and significant progress made in developing a systematic theory of coarse-graining. The contents start with first fundamental principles based on physics, then survey specific state-of-art coarse-grained force fields of proteins and nucleic acids, and provide examples of exciting biological problems that are at large scale, and hence, only amenable to coarse-grained modeling. Introduces coarse-grained models of proteins and nucleic acids. Showcases applications such as genome packaging in nuclei and understanding ribosome dynamics Gives the physical foundations of coarse-graining Demonstrates use of models for large-scale assemblies in modern studies Garegin A. Papoian is the first Monroe Martin Associate Professor with appointments in the Department of Chemistry and Biochemistry and the Institute for Physical Science and Technology at the University of Maryland.

Coarse-Graining of Condensed Phase and Biomolecular Systems

Download Coarse-Graining of Condensed Phase and Biomolecular Systems PDF Online Free

Author :
Release : 2008-09-22
Genre : Science
Kind : eBook
Book Rating : 564/5 ( reviews)

GET EBOOK


Book Synopsis Coarse-Graining of Condensed Phase and Biomolecular Systems by : Gregory A. Voth

Download or read book Coarse-Graining of Condensed Phase and Biomolecular Systems written by Gregory A. Voth. This book was released on 2008-09-22. Available in PDF, EPUB and Kindle. Book excerpt: Exploring recent developments in the field, Coarse-Graining of Condensed Phase and Biomolecular Systems examines systematic ways of constructing coarse-grained representations for complex systems. It explains how this approach can be used in the simulation and modeling of condensed phase and biomolecular systems. Assembling some of the most influential, world-renowned researchers in the field, this book covers the latest developments in the coarse-grained molecular dynamics simulation and modeling of condensed phase and biomolecular systems. Each chapter focuses on specific examples of evolving coarse-graining methodologies and presents results for a variety of complex systems. The contributors discuss the minimalist, inversion, and multiscale approaches to coarse-graining, along with the emerging challenges of coarse-graining. They also connect atomic-level information with new coarse-grained representations of complex systems, such as lipid bilayers, proteins, peptides, and DNA.

Dynamics of Engineered Artificial Membranes and Biosensors

Download Dynamics of Engineered Artificial Membranes and Biosensors PDF Online Free

Author :
Release : 2018-05-03
Genre : Business & Economics
Kind : eBook
Book Rating : 507/5 ( reviews)

GET EBOOK


Book Synopsis Dynamics of Engineered Artificial Membranes and Biosensors by : William Hoiles

Download or read book Dynamics of Engineered Artificial Membranes and Biosensors written by William Hoiles. This book was released on 2018-05-03. Available in PDF, EPUB and Kindle. Book excerpt: A state-of-the-art guide to building synthetic membranes for biological devices, covering their construction, measurement, and modelling.

Understanding Molecular Simulation

Download Understanding Molecular Simulation PDF Online Free

Author :
Release : 2001-10-19
Genre : Science
Kind : eBook
Book Rating : 989/5 ( reviews)

GET EBOOK


Book Synopsis Understanding Molecular Simulation by : Daan Frenkel

Download or read book Understanding Molecular Simulation written by Daan Frenkel. This book was released on 2001-10-19. Available in PDF, EPUB and Kindle. Book excerpt: Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the "recipes" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique for a given application. A wide variety of tools exist, so the choice of technique requires a good understanding of the basic principles. More importantly, such understanding may greatly improve the efficiency of a simulation program. The implementation of simulation methods is illustrated in pseudocodes and their practical use in the case studies used in the text. Since the first edition only five years ago, the simulation world has changed significantly -- current techniques have matured and new ones have appeared. This new edition deals with these new developments; in particular, there are sections on: - Transition path sampling and diffusive barrier crossing to simulaterare events - Dissipative particle dynamic as a course-grained simulation technique - Novel schemes to compute the long-ranged forces - Hamiltonian and non-Hamiltonian dynamics in the context constant-temperature and constant-pressure molecular dynamics simulations - Multiple-time step algorithms as an alternative for constraints - Defects in solids - The pruned-enriched Rosenbluth sampling, recoil-growth, and concerted rotations for complex molecules - Parallel tempering for glassy Hamiltonians Examples are included that highlight current applications and the codes of case studies are available on the World Wide Web. Several new examples have been added since the first edition to illustrate recent applications. Questions are included in this new edition. No prior knowledge of computer simulation is assumed.

Coarse Grained Simulation and Turbulent Mixing

Download Coarse Grained Simulation and Turbulent Mixing PDF Online Free

Author :
Release : 2016-06-30
Genre : Science
Kind : eBook
Book Rating : 047/5 ( reviews)

GET EBOOK


Book Synopsis Coarse Grained Simulation and Turbulent Mixing by : Fenando F. Grinstein

Download or read book Coarse Grained Simulation and Turbulent Mixing written by Fenando F. Grinstein. This book was released on 2016-06-30. Available in PDF, EPUB and Kindle. Book excerpt: Reviews our current understanding of the subject. For graduate students and researchers in computational fluid dynamics and turbulence.

You may also like...